This covers all the skips that we use in Any% Rogue. They work on other difficulty levels as well, as long as you take care in executing them whenever the guards are around you. 2 things to remember - you need to keep holding Run button to keep the storage with you. And if you run out of stamina - storage will get executed automatically (which is usually bad).
Feel free to add more below.
Chapter 2 - Vent storage. Aim a throwable object at the vent, press Action and run away. Once you get stuck in that place in the wall - press Action again to get dragged away and clip through - make sure you are still holding Run button while clipping through the wall, to execute Storage for the 2nd time.
Chapter 3 - The House of Blossoms OoB. If you don't have a throwable object - you can pick one up near the entrance (check video at the start). This section needs a lot of practice and understanding where NPCs are located at the moment; your main object is to alert blossom near the bird cage (you can softly bump into her to make sure), so the guards runs up to her to ask what's wrong - this will move him away from your part. Before activating the storage - regain a bit of your stamina by standing still, then do it - and once you see heartbeat icon again in the middle of the running - stop again. Don't forget to press LMB while running - this will save your bottle for next location. As long as you follow inputs and directions in the video you should be able to make it to the end - once you see Autosave symbol appear - hit F9.
@TheStunningParallel does it in the different place which is faster by a few seconds, check it out:
Chapter 3 - Bookshelf skip. This is an absolute shitshow of a skip, and you need one throwable object for it. You store the animation of opening the chest and run down the staircase - then you will have to try this skip for yourself and see where it works best for you. In the video i stand in the specific place where skip works 9 times out of 10 for me. Just let go of all buttons to execute the storage and get booted into the window, from where you can safely reach next checkpoint.
Try to save the bottle, because you will need it later on in the ruins. to do storage for the lever, which is rather simple on it's own.
Chapter 4 - Great safe clip. This works easily on 1.0 and 1.1 versions of the game. It BARELY works on 1.7 - you have to do some insane moves to try and clip through, while on early patches you literally hold 2 buttons and clip through, after cancelling out of safe code inputting.
Chapter 5 - Vent storage. Another storage, but this time - we pull out a bow and aim it to be able to crouch, while still having the storage saved. It doesn't matter which arrow you use.
Chapter 5 - Treatment Center storage. One of the easier tricks, since no one is in your way - however, you still need to chill for a couple of seconds before attempting this storage - just to regain your stamina. As you can see, i ran out of it by the end and barely managed to do the storage - you need to get behind that chair and let go of all buttons to get "warped" into nearby room and proceed to the vent.